Explore projects

LIANA: a LIgand-receptor ANalysis frAmework

Source of the shiny server that presents results obtained by large scale double mutant yeast screens (GIM): http://hub05.hosting.pasteur.fr/GIM_interactions/

Data and code of the article Rasoamalala et al. "Unraveling the role of rat and flea population dynamics on the seasonality of plague epidemics in Madagascar", Proceedings of the National Academy of Sciences (2025).

Code repository for the paper "An algorithm to build synthetic temporal contact networks based on close-proximity interactions data"

coGSEA with the SetRank Method

pipeline nextflow

MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.

Sero-prevalence estimates for human coronaviruses