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Individual-based model of P. vivax transmission

MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.

This repository is tied to project #17289 submitted by Prof. Anna-Bella Failloux. It will host all the developments around that project to help replicate the results from the article.

Source of the shiny server that presents results obtained by large scale double mutant yeast screens (GIM): http://hub05.hosting.pasteur.fr/GIM_interactions/

Git repository to host The PvSeroTAT RShiny app. This app provides a user-friendly interface to apply classification algorithms to detect recent infections by Plasmodium vivax, as detailed in the recent paper by Longley et al. (https://doi.org/10.1038/s41591-020-0841-4)

Pipeline to run CMS in large-scale analyses