Explore projects

You can find here the scripts corresponding to this paper: "A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach"

sPYce is a since cell and single nucleus ATAC-seq integration method across different species implemented in Python.

ID-based RAG FastAPI: Integration with Langchain and PostgreSQL/pgvector

Pipeline to run CMS in large-scale analyses

A web site for indeep

General python code for analysis pipeline

Utilities to make stats and plots from reads.

One is the interaction layer between the Alyx database (metadatas) and your programmatic interface (python).

Scripts to inject attc cassette in genome for Integron_Finder analysis