Explore projects

Rapid Peptides Generator (RPG) is a software dedicated to predict proteases-induced cleavage sites on amino acid sequences.

https://rapid-peptide-generator.readthedocs.io

LILAMS - Leucine Isotopic Labeling Analysis by MALDI-TOF mass Spectrometry was a Python software project to perform quantitative data analysis on mass spectrometry results for proteins labeled with heavy amino acids. Historical archive.

https://bbrancot.pages.pasteur.fr/prog-web-client-server/

Course material for the part about R and RStudio of the PhD course.

Maestro Cluster documentation

Running Jazayeri Simulations on Floelling Experiments

Backbone for automatic tagging backends; includes a Python implementation of PlanarLarvae.jl features and the Julia-Python communication layer

Quality-aware fastq demultiplexer. The goal is to demultiplex fastq files where the barcode is contained in the read at a known position.