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Spot Tracking Blocks plugin for Icy. This plugin brings Spot Tracking tools into Protocols (Graphical Programming)

Track Motion Profiler plugin for Icy. This plugin adds Motion Profiler and Motion Filter processors to Track Manager.

ROI Statistics plugin for Icy

Serratus project, read downloader using AWS Batch

building a minimal image based on Ubuntu LTS 18.04 for CI (based on the singularity recipe at https://gitlab.pasteur.fr/tru/ubuntu-lts18.04-maestro)

building a miniconda minimal image based on Ubuntu LTS 18.04 for CI

Shiny app for the analysis of single cell data

Compute the intensity profile of ROI contour along Z (3D) and T (timelaps) dimension. Generates a workbook document containing all the intensity values for each point of the contour, can be plotted as graph or exported as CSV