Explore projects
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GIPhy / AlienTrimmer
GNU Affero General Public License v3.0Fast trimming of sequencing reads
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Blaise LI / libsnp
GNU General Public License v3.0 or laterUpdated -
GIPhy / MSAshrink
GNU Affero General Public License v3.0Multiple Sequence Alignment shrinking
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Quang tru HUYNH / localcolabfold
MIT LicenseDocker build from https://github.com/YoshitakaMo/localcolabfold
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Blaise LI / libdeseq
GNU General Public License v3.0 or laterSome helpers to call DESeq2 using rpy2 in python.
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Quentin LECLERC / CTCmodeler
GNU General Public License v3.0 or laterUpdated -
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Quang tru HUYNH / singularity-docker-busybox
GNU General Public License v3.0 onlyUpdated -
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Bioimage Analysis / Icy / Extensions / Color picker threshold
GNU General Public License v3.0 onlyImage segmentation by representative colors selection. Two versions are available : – thresholding – positive and negative colors selection and SVM learning
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Bioinformatics and Genome Analyses 2019 - http://meetings.embo.org/event/19-genome-analyses
Program at https://webext.pasteur.fr/tekaia/BCGA2019/BCGA2019_Prog.html
Previous events: http://webext.pasteur.fr/tekaia/BGA_courses.html
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Bioimage Analysis / Icy / Extensions / Connected Components
GNU General Public License v3.0 onlyThis plugin extracts groups of connected pixels in 2D and 3D based on their intensity and that of the background. Works on both binary and gray-scale data. Output can be pushed to the swimming pool for other plug-ins to further exploi
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Quang tru HUYNH / micromamba-py310-pytorch-cuda11.7
GNU General Public License v3.0 or laterUpdated -
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