Explore projects
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GIPhy / MSTclust
GNU Affero General Public License v3.0Minimum Spanning Tree-based clustering
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apitsill / blah1
GNU Affero General Public License v3.0Updated -
Bioimage Analysis / Javadoc Parser
GNU General Public License v3.0 onlyA tool to parse the javadoc of a file. Mostly used now by the Script Editor.
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Bioimage Analysis / Label Extractor
GNU General Public License v3.0 onlyExtracts labeled objects from a binary or labeled image into ROI using connected component analysis
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Bioimage Analysis / Linear Programming
GNU General Public License v3.0 onlyA open-source utility library for linear programming in Java with the simplex algorithm.
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Bioimage Analysis / Mask Editor
GNU General Public License v3.0 onlyThis plugin is designed to manipulate binary masks over images. It contains all the basic tools to manage such objects.
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Bioimage Analysis / NHerve Image Analysis
GNU General Public License v3.0 onlyA toolbox to chain image analysis processes
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Bioimage Analysis / NHerve Matrix
GNU General Public License v3.0 onlyA patched version of the Jama library. Internal structures accessors and package name added. The original version can be found here : http://math.nist.gov/javanumerics/jama/
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Bioimage Analysis / NHerve Toolbox
GNU General Public License v3.0 onlyMy own toolbox used for all the plugins I developed.
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Bioimage Analysis / Quickhull
GNU General Public License v3.0 onlyQuickHull library for Icy. Computes convex envelopes of random point sets in 2D or 3D.
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Bioimage Analysis / Rhino for Icy
GNU General Public License v3.0 onlyRhino Library for Icy
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Bioimage Analysis / Rigid Registration
GNU General Public License v3.0 onlyA simple tool to correct chromatic shifts as well as temporal drift (including translations and rotations), based on spectral correlation.
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Bioimage Analysis / Vecmath
GNU General Public License v3.0 onlyProvides 3D vector mathematics classes.
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Bioimage Analysis / ROI intensity evolution
GNU General Public License v3.0 onlyCompute and display the intensity evolution for regions of interests (ROIs) through time. Results can be refreshed automatically as ROIs are changed.
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Bioimage Analysis / ROI Pool
GNU General Public License v3.0 onlyManage a list of ROIs that the user can store and pop back in one click.
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Bioimage Analysis / ROI tagger
GNU General Public License v3.0 onlyCreate a list of tag and apply them to ROIs.
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Quang tru HUYNH / singularity-docker-aydin-gpu
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Spot Detection Utilities
GNU General Public License v3.0 onlyUpdated