Beamer (LaTeX) template really close to the official Pasteur pptx theme

HUB transcriptomic snakemake pipeline

Icy is an open community platform for bioimage informatics

Automatic detection of epithelial cell events as cell extrusion

Compute RNA expression around a reference position

Bio-Formats library patched for Icy. The patch consist of replacing Apache Commons IO library by a newer version and also replacing org.json library with the custom version embedded into Micro-Manager to make it work properly.

Toolbox to create and manipulate result tables with plug-ins and protocols, and export as text file or to your favorite spreadsheet software

Downloading FASTQ files from ENA

Individual-based model of P. vivax transmission

scientific python course given in 2021

Old parent POM for all Icy core related projects (Icy-Kernel and customized libraries used for Icy-Kernel). Now we need to use the POM Icy as unique parent POM file: https://gitlab.pasteur.fr/bia/parent-pom-base

Old parent POM for all Icy plugin projects. Need to use the POM Icy as unique parent POM file: https://gitlab.pasteur.fr/bia/parent-pom-base

scripts to prepare gwas data for using PAINTOR (https://github.com/gkichaev/PAINTOR_V3.0)