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Track Manager plugin for Icy

Script Editor plugin for Icy

This Icy plugin allows to compute and display the histogram of a sequence, with a more accurate control on the histogram parameters. It also enables the computation of histograms on ROIs.

Jama Matrix Package library for Icy

A plugin allowing to create a graphic showing the intensity profile of 2D ROIs

The Java Native Access (JNA) library for Icy

https://github.com/java-native-access/jna

Google Gson library for Icy : https://github.com/google/gson

Local z-projection via the determination of a plane of reference.

Icy is an open community platform for bioimage informatics

Intensity projection plugin. It does intensity project along depth or time with multiple algorithms: mean, max, median, variance, standard deviation, saturated sum. Projection can also be restricted to ROI.