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Building a supermatrix of characters from a set of multiple sequence alignments

This plugin extracts groups of connected pixels in 2D and 3D based on their intensity and that of the background. Works on both binary and gray-scale data. Output can be pushed to the swimming pool for other plug-ins to further exploi

Creates convex versions of regions of interests in 2D or 3D using the QuickHull library.

coverage profile from read alignments

This Icy bioimage analysis plugin was developped to help biologists detect late cytokinetic bridges on static immunofluorescence images.

DeepLearning4J library for Icy. Website: https://deeplearning4j.konduit.ai/ Github: https://github.com/eclipse/deeplearning4j

Distance Transforms Plugin for Icy

Translating the maximum number of codons using the minimum number of ORFs

Extracting a nucleotide segment from a FASTA-formatted file

EHCache 3 for Icy https://www.ehcache.org/