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The Java Native Access (JNA) library for Icy

https://github.com/java-native-access/jna

Google Gson library for Icy : https://github.com/google/gson

Local z-projection via the determination of a plane of reference.

Icy is an open community platform for bioimage informatics

Fiji plugin to register 3D movies and tracks of cells moving on fiber imaged in transmitted light.

Intensity projection plugin. It does intensity project along depth or time with multiple algorithms: mean, max, median, variance, standard deviation, saturated sum. Projection can also be restricted to ROI.

It is a toy plugin to test semi-supervised texture segmentation using the new SLBPriu texture descriptor.

SLIC: Simple Linear Iterative Clustering

An Icy plugin implementing this popular segmentation technique

Compute and display the intensity evolution for regions of interests (ROIs) through time. Results can be refreshed automatically as ROIs are changed.