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Scripts to inject attc cassette in genome for Integron_Finder analysis

import from github

From experiences acquired developing https://gitlab.pasteur.fr/metagenomics/metagenedb, create a light version of it with FastAPI as a backend and SQLModel as ORM

Automatic detection of epithelial cell events as cell extrusion

https://github.com/dialvarezs/alphafold

Region segmentation

compress nd2 files

This will contain the minimal necessary codes to reproduce the image analysis (BF and IF) from the preprint https://arxiv.org/abs/2303.17522