Individual-based model of P. vivax transmission
Evolutionary Contact wrapper for ARIA software
Code and data for the article by Paireau et al. "An ensemble model based on early predictors to forecast COVID-19 healthcare demand in France"
Estimating standard descriptive statistics from FASTQ file
openbabel rpm recipes for iPPI-DB. 2.4.1 is too old and buggy on fingerprints and tanimoto, so until the next release we use custom rpms
Code and data for the article "Integrating information from historical data into epidemic forecast: Application to influenza in France" by Alessio Andronico, Juliette Paireau and Simon Cauchemez