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A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jass

MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.

MeRIP-Seq pipeline analysis for m6a methylation site detection Author: Christophe Bécavin, Hub Bioinformatic and Biostatistic, Institut Pasteur

pipeline nextflow

http://hub05.hosting.pasteur.fr/aduval/SimulPopB_shiny/

Keeping R and Python specific snippets

Code and data for the article "Integrating information from historical data into epidemic forecast: Application to influenza in France" by Alessio Andronico, Juliette Paireau and Simon Cauchemez

This repository is tied to project #17289 submitted by Prof. Anna-Bella Failloux. It will host all the developments around that project to help replicate the results from the article.