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A module handling basic fonctionnality needed in django project such as base.html using bootstrap, account settings, preferences management, ...
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scientific python course given in 2021
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iPPI-DB - django application
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Script to pre-process GWAS inputs
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Protocols (GUI part) plugin for Icy
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Active Contours plugin for Icy
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A simple plugin to randomly assign colors to ROIs in sequences. Also available for protocols
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Bio-Formats library patched for Icy. The patch consist of replacing Apache Commons IO library by a newer version and also replacing org.json library with the custom version embedded into Micro-Manager to make it work properly.
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Workflow that takes raw legiolist data and process it to be integrated in a legiolist intermine instance
data-preproc... legiolist nextflow+ 1 more -
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Micro-Manager plugin for Icy
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Walkthrough from a conda command line installation to a container (docker or singularity) for maestro, Inception gpulab, reproduceable, sharing among colleagues.
Work in progress.
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Insubstantial project (https://github.com/Insubstantial) clone for Icy (fixes + minors customizations). Previous version of the repository can be found at https://github.com/Icy-imaging/Icy-Insubstantial
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Docker build from https://github.com/YoshitakaMo/localcolabfold
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Spot Tracking plugin for Icy
