GitLab

Utilities to cluster sequences.

Utilities to make a consensus from a sequence alignment.

Workflow that takes raw legiolist data and process it to be integrated in a legiolist intermine instance

legiolist deployment

Some scripts to plot results from my HTS pipelines.

Some helpers for my HTS snakemake workflows.

An Ansible role for managing a PostgreSQL server

SHAMAN is a SHiny application for Metagenomic ANalysis including the normalization, the differential analysis and mutiple visualization.

This Icy plugin allows to compute and display the histogram of a sequence, with a more accurate control on the histogram parameters. It also enables the computation of histograms on ROIs.

An Icy plugin made for random generation of crops on a given sequence

Miscellaneous stuff to deal with Ribo-seq data.