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A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:
clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jassUpdated -
galaxy-team / galaxy-tools
GNU General Public License v3.0 or laterUpdated -
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Nyx / LarvaTagger.jl
MIT License2D viewer for behaving larvae, with manual and automatic behavior tagging capabilities
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This will contain the minimal necessary codes to reproduce the image analysis (BF and IF) from the preprint https://arxiv.org/abs/2303.17522
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Lorenzo ZOLFANELLI / zolfa-nd2reader
GNU General Public License v3.0 onlyUpdated -
GIPhy / wgetGenBankWGS
GNU Affero General Public License v3.0Downloading genome assembly files from GenBank or RefSeq
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GIPhy / wgetENAHTS
GNU Affero General Public License v3.0Downloading FASTQ files from ENA
Topics: fastqUpdated -
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Nyx / TaggingBackends
MIT LicenseBackbone for automatic tagging backends; includes a Python implementation of PlanarLarvae.jl features and the Julia-Python communication layer
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Nyx / PlanarLarvae.jl
MIT LicenseUpdated -
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