Explore projects

Creating figures showing linear maps between genomes

Find characters shared by a group of aligned sequences

Estimating standard descriptive statistics from FASTQ files

Extracting a nucleotide segment from a FASTA-formatted file

Translating the maximum number of codons using the minimum number of ORFs

Building a supermatrix of characters from a set of multiple sequence alignments

Translating and back-translating codon and amino-acid sequence files

Fast trimming of sequencing reads

Fast removal of contaminating reads from FASTQ file(s)

creating figures that represent the positions of long repeats in a chromosome

Inferring alien oligonucleotides (adapters, primers, ...) from FASTQ file

Minimum Spanning Tree-based clustering

MeRIP-Seq pipeline analysis for m6a methylation site detection Author: Christophe Bécavin, Hub Bioinformatic and Biostatistic, Institut Pasteur

Clipper - A polygon clipping library

Big Image Tools - Read and write large 2D images with Icy

B-spline registration adaptation for ICY based on BunwarpJ plugin from ImageJ