Histopathological image classification

Fast greedy clustering of genomes based on minhash similarity

Utilities to make stats and plots from reads.

Extra layer on top of cwltool to distribute jobs on HPC plateforms

library to visualize biological data

Django Data Import Utilities

EMBO Course on Integrative Structural Biology 2019 http://meetings.embo.org/event/19-structural-biology

A module handling basic fonctionnality needed in django project such as base.html using bootstrap, account settings, preferences management, ...

Downloading genome files in FASTA format from GenBank or RefSeq

/etc/hosts with locally defined aliases

Fast distance-based phylogenetic inference from unaligned genome sequences

You can find here the HMM profiles and the macsyfinder models that was used in the paper Diversification of the type IV filament super-family into machines for adhesion, secretion, DNA transformation and motility.