RIP-Seq and RNA-Seq of an RNA-binding protein secreted by Listeria monocytogenes which activates RIG-I signaling Secreted bacterial RNAs have recently emerged as a novel host-pathogen interaction mode. Naked RNA molecules are highly labile in the ext

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gbk2ENA allows converting Genbank files into EMBL-like files suitable for submission to the ENA

Individual-based model of P. vivax transmission

AEGIS2018 course practical

A python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium

SLIC: Simple Linear Iterative Clustering

An Icy plugin implementing this popular segmentation technique

Python GUI to control an AOTF.

Sources for the server running at http://hub05.hosting.pasteur.fr/NMD_complexes/

openbabel rpm recipes for iPPI-DB. 2.4.1 is too old and buggy on fingerprints and tanimoto, so until the next release we use custom rpms

Surf feature matching

SMARTdenovo assembly tool wrapped into a singularity for HPC cluster executions

Singularity to wrap minimap2 and miniasm in order to perform a long read de novo assembly

A wrapper for the canu long read assembly tool

Course material for the part about R and RStudio of the PhD course.