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Projects specific python code pipeline for analysis
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One is the interaction layer between the Alyx database (metadatas) and your programmatic interface (python).
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A module handling basic fonctionnality needed in django project such as base.html using bootstrap, account settings, preferences management, ...
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A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:
clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jassUpdated -
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This will contain the minimal necessary codes to reproduce the image analysis (BF and IF) from the preprint https://arxiv.org/abs/2303.17522
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