GitLab

Building a multiple sequence alignment well-suited for phylogenetic analysis from read mapping data

Serratus project, read downloader using AWS Batch

Minimum Spanning Tree-based clustering

The impact of genetic diversity on gene essentiality within the E. coli species

Asia-Pacific ICEMER cohort ran in Madang (Papua New-Guinea) in early 2020. The purpose of this repository is to centralize R scripts and developments to streamline the data extraction and analysis.

Miscellaneous stuff to deal with Ribo-seq data.

Distance Transforms Plugin for Icy

M2 Internship in RBFP team

Sero-prevalence estimates for human coronaviruses

Docker for InterMine

Pipeline to run CMS in large-scale analyses