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The impact of genetic diversity on gene essentiality within the E. coli species
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Utilities to make a consensus from a sequence alignment.
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An Ansible role for managing a PostgreSQL server
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Material for Diderot 2020-2021
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Utilities to cluster sequences.
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This Icy plugin allows to compute and display the histogram of a sequence, with a more accurate control on the histogram parameters. It also enables the computation of histograms on ROIs.
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An Icy plugin made for random generation of crops on a given sequence
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Deprojection of a 2D segmentation onto a 2.5D mesh
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Building a multiple sequence alignment well-suited for phylogenetic analysis from read mapping data
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Serratus project, read downloader using AWS Batch
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Minimum Spanning Tree-based clustering
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The impact of genetic diversity on gene essentiality within the E. coli species
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Asia-Pacific ICEMER cohort ran in Madang (Papua New-Guinea) in early 2020. The purpose of this repository is to centralize R scripts and developments to streamline the data extraction and analysis.
