release v9.7: R/v4.1.2/ig_clustering/v1.1:gitlab_v9.7 with svglite added and debugged

R/v4.1.2/ig_clustering/v1.1/Dockerfile

 #########################################################################
 ##                                                                     ##
 ##     Dockerfile                                                      ##
-##     R extended                                                      ##
+##     R ig_clustering                                                      ##
 ##                                                                     ##
 ##     Gael A. Millot                                                  ##
 ##     Bioinformatics and Biostatistics Hub                            ##
@@ -25,7 +25,7 @@
 # sudo docker cp <containerNAMES>:/installed_r_packages.csv </host/path/target>
 
 # base image:
-FROM gmillot/r_v4.1.2_extended_v3.0:gitlab_v9.3
+FROM gmillot/r_v4.1.2_ig_clustering_v1.0:gitlab_v9.3
 # Warning: the name must be exactly what is written in the docker images interface, or sudo docker image ls. Here, the image is present locally, or distantly on the gmillot repo. Thus, gmillot/r-base:4.0.5 is correct.
 
 LABEL Gael.Millot=gael.millot@pasteur.fr

R/v4.1.2/ig_clustering/v1.1/building.log

@@ -13,11 +13,11 @@ apt-get update
 
 Hit:1 http://ppa.launchpad.net/c2d4u.team/c2d4u4.0+/ubuntu focal InRelease
 Hit:2 http://archive.ubuntu.com/ubuntu focal InRelease
-Hit:3 http://ppa.launchpad.net/cran/poppler/ubuntu focal InRelease
-Hit:4 http://ppa.launchpad.net/marutter/rrutter4.0/ubuntu focal InRelease
-Hit:5 http://archive.ubuntu.com/ubuntu focal-updates InRelease
+Hit:3 http://archive.ubuntu.com/ubuntu focal-updates InRelease
+Hit:4 http://ppa.launchpad.net/cran/poppler/ubuntu focal InRelease
+Hit:5 http://archive.ubuntu.com/ubuntu focal-backports InRelease
 Hit:6 http://security.ubuntu.com/ubuntu focal-security InRelease
-Hit:7 http://archive.ubuntu.com/ubuntu focal-backports InRelease
+Hit:7 http://ppa.launchpad.net/marutter/rrutter4.0/ubuntu focal InRelease
 Reading package lists...
 
 
@@ -73,7 +73,7 @@ downloaded 120 KB
 
 
 The downloaded source packages are in
-	‘/tmp/Rtmpwc1S2m/downloaded_packages’
+	‘/tmp/RtmpUCcqIo/downloaded_packages’
 
 
 STANDARD INSTALLATION ATTEMPT FOR svglite
@@ -85,12 +85,12 @@ Content type 'application/x-gzip' length 123660 bytes (120 KB)
 ==================================================
 downloaded 120 KB
 
-foundpkgs: svglite, /tmp/Rtmpwc1S2m/downloaded_packages/svglite_2.1.1.tar.gz
-files: /tmp/Rtmpwc1S2m/downloaded_packages/svglite_2.1.1.tar.gz
-1): succeeded '/usr/lib/R/bin/R CMD INSTALL -l '/usr/local/lib/R/site-library' '/tmp/Rtmpwc1S2m/downloaded_packages/svglite_2.1.1.tar.gz''
+foundpkgs: svglite, /tmp/RtmpUCcqIo/downloaded_packages/svglite_2.1.1.tar.gz
+files: /tmp/RtmpUCcqIo/downloaded_packages/svglite_2.1.1.tar.gz
+1): succeeded '/usr/lib/R/bin/R CMD INSTALL -l '/usr/local/lib/R/site-library' '/tmp/RtmpUCcqIo/downloaded_packages/svglite_2.1.1.tar.gz''
 
 The downloaded source packages are in
-	‘/tmp/Rtmpwc1S2m/downloaded_packages’
+	‘/tmp/RtmpUCcqIo/downloaded_packages’
 
 
 

README.md

@@ -72,11 +72,17 @@ Hub-CDB Institut Pasteur & DSI Institut Pasteur
 Use the gitlab tag of the docker image (e.g., gitlab_v5.0) to get the description of the modifications below
 
 
+### 9.7
+
+Dockerfiles modified: <br />
+R/v4.1.2/ig_clustering/v1.1 at date 20230211: from gmillot/r_v4.1.2_ig_clustering_v1.0:gitlab_v9.3  with svglite added and debugged<br />
+
+
 ### 9.6
 
 Dockerfiles added: <br />
 R/v4.1.2/extended/v3.1 at date 20230211: from gmillot/r_v4.1.2_extended_v3.0:gitlab_v9.3  with svglite added<br />
-R/v4.1.2/ig_clustering/v1.1 at date 20230211: from gmillot/r_v4.1.2_ig_clustering_v1.1:gitlab_v9.3  with svglite added<br />
+R/v4.1.2/ig_clustering/v1.1 at date 20230211: from gmillot/r_v4.1.2_ig_clustering_v1.0:gitlab_v9.3  with svglite added<br />
 
 
 ### 9.5