Project 'gmillot/ig_clustering' was moved to 'gmillot/repertoire_profiler'. Please update any links and bookmarks that may still have the old path.
release v14.3: Isotype class and subclass columns added in the output all_passed_seq.tsv file.
release v14.2: Bug fixed in the metadata display in trees. Tree display improved.
release v14.1: Bug fixed in the metadata display in trees. New metadata set.
release v14.0: New meta_seq_names parameter in the nextflow.config file, that help to set the name of the column containing the fasta sequence names.
release v11.8: Error messages imporved so that now nextflow does not display all subsequent error messages because of empty file when execution is stopped by an error
release v11.7: Bug solved in the translation process: now parallelization works even if empty input file
release v11.6: Fasta files can have tabs in the header
release v11.5: nextflow.config file improved for users, README file updated, Title of donut improved, Zenodo output link updated
release v11.4: Zenodo input link updated
release v11.3: Now a zip folder is accepted as input, explanations in nextflow.config are improved
release v11.2: Donut and Tree plots slightly improved
release v11.1: Option comment_char = '' of read.table() for all .R files with read.table() in bin
release v10.4: Donut plot legend corrected
release v10.3: Spaces removed in file names, Spaces removed in the first line of each fasta file, .fas fasta extension allowed
release v10.2: xlsx2fasta.R file: error fixed for the fasta by categ
release v10.1: xlsx2fasta.R file imporved to take into account the problem of NA
release v10.0: xlsx2fasta.R file strongly improved to deal with empty sequences