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IdA Public
Zellige-core
Commits
26365a0c
Commit
26365a0c
authored
3 years ago
by
Céline TREBEAU
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refactor
- change parameters' label names
parent
65486941
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zellige-core-1.1.1
1 merge request
!20
Version for release
Pipeline
#69298
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in 12 minutes and 28 seconds
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src/main/java/fr/pasteur/ida/zellige/command/ZelligeCommand.java
+12
-12
12 additions, 12 deletions
...n/java/fr/pasteur/ida/zellige/command/ZelligeCommand.java
with
12 additions
and
12 deletions
src/main/java/fr/pasteur/ida/zellige/command/ZelligeCommand.java
+
12
−
12
View file @
26365a0c
...
...
@@ -47,40 +47,40 @@ public class ZelligeCommand< T extends RealType< T > & NativeType< T > > extends
@Parameter
(
label
=
"Otsu threshold"
,
min
=
"0"
,
max
=
"2"
,
stepSize
=
"0.1"
)
private
double
otsu
=
0.1
;
@Parameter
(
label
=
"XY
dilatation
"
,
min
=
"0"
,
max
=
"10"
)
@Parameter
(
label
=
"XY
blur radius
"
,
min
=
"0"
,
max
=
"10"
)
private
int
sigmaXY
=
1
;
@Parameter
(
label
=
"Z
dilatation
"
,
min
=
"0"
,
max
=
"10"
)
@Parameter
(
label
=
"Z
blur radius
"
,
min
=
"0"
,
max
=
"10"
)
private
int
sigmaZ
=
1
;
@Parameter
(
label
=
"Island size"
,
min
=
"0"
,
max
=
"50"
,
stepSize
=
"5"
)
@Parameter
(
label
=
"
Min
Island size"
,
min
=
"0"
,
max
=
"50"
,
stepSize
=
"5"
)
private
int
islandSize
=
5
;
@Parameter
(
label
=
"Island
neighbourhood
"
,
min
=
"4"
,
max
=
"8"
,
stepSize
=
"4"
)
@Parameter
(
label
=
"Island
connectivity
"
,
min
=
"4"
,
max
=
"8"
,
stepSize
=
"4"
)
private
int
connexity
=
4
;
@Parameter
(
label
=
"
Fir
st round Starting OSE size"
,
min
=
"0"
,
max
=
"1"
,
stepSize
=
"0.1"
)
@Parameter
(
label
=
"
1
st round Starting OSE size"
,
min
=
"0"
,
max
=
"1"
,
stepSize
=
"0.1"
)
private
double
startingOsSize1
=
0.8
;
@Parameter
(
label
=
"
Fir
st round overlap"
,
min
=
"0"
,
max
=
"50"
)
@Parameter
(
label
=
"
1
st round overlap
"
,
min
=
"0"
,
max
=
"50"
)
private
int
overlap1
=
10
;
@Parameter
(
label
=
"
Fir
st round matching rate"
,
min
=
"0.5"
,
max
=
"1"
,
stepSize
=
"0.05"
)
@Parameter
(
label
=
"
1
st round matching rate"
,
min
=
"0.5"
,
max
=
"1"
,
stepSize
=
"0.05"
)
private
double
connexityRate1
=
0.8
;
@Parameter
(
label
=
"
Seco
nd round Starting OSE size"
,
min
=
"0"
,
max
=
"1"
,
stepSize
=
"0.1"
)
@Parameter
(
label
=
"
2
nd round Starting OSE size"
,
min
=
"0"
,
max
=
"1"
,
stepSize
=
"0.1"
)
private
double
startingOsSize2
=
0.1
;
@Parameter
(
label
=
"
Seco
nd round overlap"
,
min
=
"0"
,
max
=
"50"
,
stepSize
=
"5"
)
@Parameter
(
label
=
"
2
nd round overlap"
,
min
=
"0"
,
max
=
"50"
,
stepSize
=
"5"
)
private
int
overlap2
=
10
;
@Parameter
(
label
=
"
Seco
nd round matching rate"
,
min
=
"0.5"
,
max
=
"1"
,
stepSize
=
"0.05"
)
@Parameter
(
label
=
"
2
nd round matching rate"
,
min
=
"0.5"
,
max
=
"1"
,
stepSize
=
"0.05"
)
private
double
connexityRate2
=
0.9
;
@Parameter
(
min
=
"0.05"
,
max
=
"1"
)
@Parameter
(
label
=
"Min surface size (rel to XY image size)"
,
min
=
"0.05"
,
max
=
"1"
,
stepSize
=
"0.1"
)
private
double
surfaceMinSizeFactor
;
@Parameter
(
min
=
"0"
)
@Parameter
(
label
=
"Projection width (deltaZ)"
,
min
=
"0"
)
private
int
delta
;
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