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Commit da0501a0 authored by Fabien MAREUIL's avatar Fabien MAREUIL
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typo

parent c1048621
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ippisite/ippidb/static/js/targetcentrict_networks.js
View file @ da0501a0
......@@ -31,7 +31,7 @@ var node_trace = function(nodes, edges) {
trace_PL = {
x: x_PL,
y: y_PL,
name: ' Protein/Ligand complexes',
name: 'Protein/Ligand complexes',
text: text_PL,
mode: 'markers',
type: 'scattergl',
......
ippisite/ippidb/templates/targetcentric.html
View file @ da0501a0
......@@ -54,7 +54,7 @@
<div class="card-body">
<form id="searchform" autocomplete="off" action="{% url 'cavities' %}" method="get">
<div class="input-group autocomplete">
<input id="id_search" name="search" class="form-control" type="text" placeholder="Search by PDB ID, Protein name, Uniprot ID, ligands, organism" aria-label="Search">
<input id="id_search" name="search" class="form-control" type="text" placeholder="Search by PDB ID, Protein name, Uniprot ID, ligand ID, organism" aria-label="Search">
<div class="input-group-append">
<button data-toggle="modal" data-target="#waitingmodal" type="submit" class="btn btn-outline-secondary"><i class="fas fa-search"></i></button>
</div>
......@@ -158,8 +158,8 @@
</div>
<div class="row text-justify ml-3 mr-3">
<div class="col-8 text-wrap">
Gradient colors for table is based on maximum and minimum score in the matrix.
Score is given when you mouseover a cavity name.
The color gradient for the table is based on maximum and minimum PSI (Pocket Similarity Index) in the matrix.
PSI is given when you mouseover a cavity name.
</div>
<div class="col-4">
<table class="gradiant"><tbody><tr>
......@@ -224,8 +224,8 @@
{{ cavity.chain.pdb_chain_id }} / {{ cavity.chain.protein.short_name }}
</button>
<div class="dropdown-content">
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ cavity.chain.protein.uniprot_id }}">search on cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ cavity.chain.protein.uniprot_id }}">search on compounds</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ cavity.chain.protein.uniprot_id }}">Query UniprotID in cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ cavity.chain.protein.uniprot_id }}">Query UniprotID as iPPI-DB target</a>
</div>
</span>
{% if cavity.partner.ligand %}
......@@ -235,8 +235,8 @@
{{ cavity.partner.ligand.pdb_ligand_id }}_{{ cavity.partner.ligand.supplementary_id }}
</button>
<div class="dropdown-content">
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?ligandcode={{ cavity.partner.ligand.pdb_ligand_id }}">search on cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?similar_to=ECFP4:{{ cavity.partner.ligand.canonical_smile|urlencode }}">search on compounds</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?ligandcode={{ cavity.partner.ligand.pdb_ligand_id }}">Query ligand ID in cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?similar_to=ECFP4:{{ cavity.partner.ligand.canonical_smile|urlencode }}">Query SMILES in iPPI-DB compounds</a>
</div>
</span>
{% else %}
......@@ -246,8 +246,8 @@
{{ cavity.partner.chain.pdb_chain_id }}
</button>
<div class="dropdown-content">
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ cavity.partner.chain.protein.uniprot_id }}">search on cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ cavity.partner.chain.protein.uniprot_id }}">search on compounds</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ cavity.partner.chain.protein.uniprot_id }}">Query UniprotID in cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ cavity.partner.chain.protein.uniprot_id }}">Query UniprotID as iPPI-DB target</a>
</div>
</span>
{% endif %}
......@@ -291,8 +291,8 @@
{{ distance.cavity2.chain.pdb_chain_id }} / {{ distance.cavity2.chain.protein.short_name }}
</button>
<div class="dropdown-content">
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ distance.cavity2.chain.protein.uniprot_id }}">search on cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ distance.cavity2.chain.protein.uniprot_id }}">search on compounds</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ distance.cavity2.chain.protein.uniprot_id }}">Query UniprotID in cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ distance.cavity2.chain.protein.uniprot_id }}">Query UniprotID as iPPI-DB target</a>
</div>
</span>
{% if distance.cavity2.partner.ligand %}
......@@ -302,8 +302,8 @@
{{ distance.cavity2.partner.ligand.pdb_ligand_id }}_{{ distance.cavity2.partner.ligand.supplementary_id }}
</button>
<div class="dropdown-content">
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?ligandcode={{ distance.cavity2.partner.ligand.pdb_ligand_id }}">search on cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?similar_to=ECFP4:{{ distance.cavity2.partner.ligand.canonical_smile|urlencode }}">search on compounds</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?ligandcode={{ distance.cavity2.partner.ligand.pdb_ligand_id }}">Query ligand ID in cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?similar_to=ECFP4:{{ distance.cavity2.partner.ligand.canonical_smile|urlencode }}">Query SMILES in iPPI-DB compounds</a>
</div>
</span>
{% else %}
......@@ -313,8 +313,8 @@
{{ distance.cavity2.partner.chain.pdb_chain_id }}
</button>
<div class="dropdown-content">
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ distance.cavity2.partner.chain.protein.uniprot_id }}">search on cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ distance.cavity2.partner.chain.protein.uniprot_id }}">search on compounds</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ distance.cavity2.partner.chain.protein.uniprot_id }}">Query UniprotID in cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ distance.cavity2.partner.chain.protein.uniprot_id }}">Query UniprotID as iPPI-DB target</a>
</div>
</span>
{% endif %}
......@@ -356,8 +356,8 @@
{{ distance.cavity1.chain.pdb_chain_id }} / {{ distance.cavity1.chain.protein.short_name }}
</button>
<div class="dropdown-content">
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ distance.cavity1.chain.protein.uniprot_id }}">search on cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprot_id={{ distance.cavity1.chain.protein.uniprot_id }}">search on compounds</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ distance.cavity1.chain.protein.uniprot_id }}">Query UniprotID in cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprot_id={{ distance.cavity1.chain.protein.uniprot_id }}">Query UniprotID as iPPI-DB target</a>
</div>
</span>
{% if distance.cavity1.partner.ligand %}
......@@ -367,8 +367,8 @@
{{ distance.cavity1.partner.ligand.pdb_ligand_id }}_{{ distance.cavity1.partner.ligand.supplementary_id }}
</button>
<div class="dropdown-content">
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?ligandcode={{ distance.cavity1.partner.ligand.pdb_ligand_id }}">search on cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?similar_to=ECFP4:{{ distance.cavity1.partner.ligand.canonical_smile|urlencode }}">search on compounds</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?ligandcode={{ distance.cavity1.partner.ligand.pdb_ligand_id }}">Query ligand ID in cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?similar_to=ECFP4:{{ distance.cavity1.partner.ligand.canonical_smile|urlencode }}">Query SMILES in iPPI-DB compounds</a>
</div>
</span>
{% else %}
......@@ -378,8 +378,8 @@
{{ distance.cavity1.partner.chain.pdb_chain_id }}
</button>
<div class="dropdown-content">
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ distance.cavity1.partner.chain.protein.uniprot_id }}">search on cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ distance.cavity1.partner.chain.protein.uniprot_id }}">search on compounds</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'cavities' %}?uniprotid={{ distance.cavity1.partner.chain.protein.uniprot_id }}">Query UniprotID in cavities</a>
<a target="_blank" rel="noopener noreferrer" href="{% url 'compound_list' %}?uniprot_id={{ distance.cavity1.partner.chain.protein.uniprot_id }}">Query UniprotID as iPPI-DB target</a>
</div>
</span>
{% endif %}
......
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