Commits · 6f5a4bb9516a25b374f1ec919f063221066cdd1c · iPPIDB / ippidb-web

Jul 31, 2018

restructure the compounds list view · 6f5a4bb9

Hervé MENAGER authored 6 years ago

* this view is now class based and a lot more structured
* filters are handled supposedly in a clever manner


Former-commit-id: 510e9b5282b06d28fb839ba20ff44d76ab41f584

6f5a4bb9

Jul 29, 2018
- denormalize ppi name to improve compound query performance · 85b91008
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: efe273eac847d110d0b8791fa2eb89191d212ffa
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  85b91008
Jul 28, 2018
- avoid crash when the compounds list resultset is empty · 77ebf4d0
  Hervé MENAGER authored 6 years ago
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Former-commit-id: bc41c38f663e431a2bfb2b8bb7036b0ed249d410
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  77ebf4d0
Jul 27, 2018
- Ppi fields pdb_id and family can be blank · e8419a04
  Hervé MENAGER authored 6 years ago
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Former-commit-id: a334477697b35ef6e5ca68ecff70604d49a59c9f
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  e8419a04
- CompoundActivityResult inhibition_percentage can be blank · ab60d00a
  Hervé MENAGER authored 6 years ago
```
sqlite db modified


Former-commit-id: 5c12ac45f86f8e3865adbd9892e7c757372417ea
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  ab60d00a
- CompoundActivityResult inhibition_percentage can be blank · 164f039b
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 33780e413e6e3cd5b2b8fb919eabb8fb5c85db70
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  164f039b
- journal name can be blank in Bibliography patent entries · ff7ac9b5
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 266ba132a332918bcc37d816da1c5776acff2833
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  ff7ac9b5
- corrections to model for MDDRCompoundImport · 0600bfcd
  Hervé MENAGER authored 6 years ago
```
- name is now a text field
- add "Phase 0" and "Suspended" for development phases


Former-commit-id: f8b3e83ba413335a74f85c216078246180176eb6
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  0600bfcd
- convert canonical_smiles from CharField(500) to TextField · caba9899
  Hervé MENAGER authored 6 years ago
```
to think these could only be 500 chars long was a pipe dream...


Former-commit-id: a7b7445303b98f64de0edff49e623b9ba01fff9a
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  caba9899
- MDDRActivityClass name is now a TextField · ddc3e5b3
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: a8482013b45e68c02ad369f976f83e33ef1b5577
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  ddc3e5b3
Jul 26, 2018

parse correctly activity classes from MDDR SDF files · fc39b00d

Hervé MENAGER authored 6 years ago

the list of activity classes is sep. by line breaks, NOT commas


Former-commit-id: 1cd78ad8f3c3215e1179bed6b6d3c31f34f92ed4

fc39b00d

Jul 25, 2018
- define biplot json as TextField to avoid max_length pg problems · b2dfb590
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: d0a059132b70a76919992b0c8aafbe2e5cd3ffd5
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  b2dfb590
- migrate version of the database to change cmax into c_max · 99c8d0f5
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: be774d59e639c817a67ebfb187fd28f53f91e6a6
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  99c8d0f5
- hack the squashed migration to have it actually work · ed4a6d99
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 66beebe3f8c1fcb5694f2b2c63cc82f3109a7975
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  ed4a6d99
- add squashed migration for pristine DBs ;) · a2da0027
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: d062fb81c1f37bcb3e205375dd440b5c3a0fd59e
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  a2da0027
- rename cmax to c_max in ippidb model · 02431938
  Hervé MENAGER authored 6 years ago
```
cmax is a reserved iPPI-DB word


Former-commit-id: 5aeb97dd481dc50c2816216dff1b281cde676843
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  02431938
Jul 24, 2018
- add psycopg2 to django requirements.txt · 89d35579
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 318895cc68e1304281bea635e8fd0a137f0ba667
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  89d35579
- set db backend to postgreSQL in production · 9c5f6af5
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 349fa6ec3df49fd6c55034dd3a4ce2822e7ceabf
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  9c5f6af5
- Update of CompoundForm ad ProteinDomainComplexForm · a670b417
  Rachel TORCHET authored 6 years ago
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Former-commit-id: b5c77033eeee60f02d839d0f2b3c7f8227cf4078
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  a670b417
Jul 23, 2018
- correct typo in compounds list column headers · 0f1940de
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 2d4a7a942f8bb8da801cb652f43a3e50f567111a
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  0f1940de
- add number of chiral centers in compounds list table view · 7aa0a047
  Hervé MENAGER authored 6 years ago
```
cf #43


Former-commit-id: f19a9cd22835967ed5d1b216a4fc7393929a6aa6
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  7aa0a047
- add common name and improve id display in compounds list · 15174077
  Hervé MENAGER authored 6 years ago
```
cf #43


Former-commit-id: c473e21070a65337d1026d6c6ec5b70530cd155a
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  15174077
- do not try to make mddr_compound editable in django-admin · 12922d3b
  Hervé MENAGER authored 6 years ago
```
this results in a timeout due to the size of MDDR
closes #76


Former-commit-id: fa4dbc0f95f38a5ff92b4e727d0d484e3d8a173c
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  12922d3b
- add compound id in the django admin interface · badcce6d
  Hervé MENAGER authored 6 years ago
```
esp. useful now that compound ids are permanent (cf #51)


Former-commit-id: 3eee58ba2afdb7a62b68eaa569cbdfe3f82747f9
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  badcce6d
- put the login block to the top right of the screen · e4720e7c
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: c0e9c8f9c4bb4f6357211b1aac2e0b654d0bd743
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  e4720e7c
Jul 22, 2018
- require last version of django-allauth, for oauth 2.0 compat. · e06baebe
  Hervé MENAGER authored 6 years ago
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Former-commit-id: 1265088ea3c6b12106b4e926bb0097d57b66995d
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  e06baebe
- correct display of ppi family filter badges · 6a1b019d
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: cc67969998640c44c7a06d9dc0ad6c87f41cbef5
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  6a1b019d
- add PPI families to table in compounds list · 160fc3cb
  Hervé MENAGER authored 6 years ago
```
cf #48


Former-commit-id: b7d69398315e74616ed0b19d027b320c9751ab3b
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  160fc3cb
- correct nb_aromatic_sssr and nb_rotatable_bonds in compounds list · cb6ae1cf
  Hervé MENAGER authored 6 years ago
```
there were typos in the "display columns" field of the table display


Former-commit-id: 7d6a0d8ee0d52c5063f17de8ba2bb20a1c4fae62
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  cb6ae1cf
- optimize number of publications display in compounds list · 9be3c3b4
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 98deac319334dcc074ee177f495931721df54ab1
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  9be3c3b4
- customize style for authentication templates · 9cece641
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: a91806147f213ac3d7dec32ffd6d29207fd3b54d
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  9cece641
- add academicons fonts and style · 26f33b5e
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 29be9c121848f094ed2ebf91f3f2cb960b22e197
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  26f33b5e
- add extra_js block in base template · cfc2c59d
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 7c46cbb220129665b137278ee1e385a22540d4b2
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  cfc2c59d
- fix bug in removeFromSelection, used by filter badge remove icon · 8e66844c
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: fc18b928a6024bf79ba3cdbb7131392c925ab96a
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  8e66844c
Jul 20, 2018
- add customized login form using bootstrap (WIP) · 6ad42f4b
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 95debae1cd98d7441a48da8dfd2fffcd850d765b
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  6ad42f4b
- require login to access contribution wizard · 33f6b0fe
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: f20277fa812fe898f4dbe7c6b9975b65d6ba0c8f
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  33f6b0fe
- add admin-session CSS to admin-session pages. · 721a1b30
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 0694064b383d0a008c624cf49538d231d33f14ca
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  721a1b30
- correct slider default value is cutoff value is "minimal value" · 6ff5679d
  Hervé MENAGER authored 6 years ago
```
cf #67


Former-commit-id: 76ab2801d1fe8455d132d103d8ec635c3249c9ce
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  6ff5679d
- fix icon/text space in filters for compounds list · 088471b0
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 97ea0245bd21eb4e9509c6ddc4f3d26590120717
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  088471b0
- fix ordering of the sorting options in compounds list · cd206686
  Hervé MENAGER authored 6 years ago
```
Former-commit-id: 38b80a9cfdb558330ebf6dd07cab8850184b989c
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  cd206686