Merge branch 'add_frontmatter' into 'dev'

Add frontmatter

See merge request mdm-lab/wiki!10

content/2.defense-systems/abi2.md

@@ -5,9 +5,12 @@ tableColumns:
       doi: 10.1016/j.mib.2005.06.006
       abstract: |
         Abortive infection (Abi) systems, also called phage exclusion, block phage multiplication and cause premature bacterial cell death upon phage infection. This decreases the number of progeny particles and limits their spread to other cells allowing the bacterial population to survive. Twenty Abi systems have been isolated in Lactococcus lactis, a bacterium used in cheese-making fermentation processes, where phage attacks are of economical importance. Recent insights in their expression and mode of action indicate that, behind diverse phenotypic and molecular effects, lactococcal Abis share common traits with the well-studied Escherichia coli systems Lit and Prr. Abis are widespread in bacteria, and recent analysis indicates that Abis might have additional roles other than conferring phage resistance.
+    Sensor: ''
+    Activator: ''
+    Effector: ''
+    PFAM: PF07751
 ---
 
-# Abi2
 # Abi2
 The Abi2 system is composed of one protein: Abi_2.
 
@@ -29,3 +32,4 @@ Among the 22k complete genomes of RefSeq, this system is present in 1210 genomes
 
 ## Relevant abstracts
 
+

content/2.defense-systems/abia.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF00078, PF18160, PF18732
 ---
 
-# AbiA
 # AbiA
 The AbiA system have been describe in a total of 2 subsystems.
 
@@ -51,3 +51,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abib.md

@@ -10,7 +10,6 @@ tableColumns:
     Effector: Unknown
 ---
 
-# AbiB
 # AbiB
 The AbiB system is composed of one protein: AbiB.
 

content/2.defense-systems/abic.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF16872
 ---
 
-# AbiC
 # AbiC
 The AbiC system is composed of one protein: AbiC.
 
@@ -52,3 +52,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abid.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF07751
 ---
 
-# AbiD
 # AbiD
 The AbiD system is composed of one protein: AbiD.
 
@@ -46,3 +46,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abie.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF08843, PF09407, PF09952, PF11459, PF13338, PF17194
 ---
 
-# AbiE
 # AbiE
 AbiE is a family of an anti-phage defense systems. They act through a Toxin-Antitoxin mechanism, and are comprised of a pair of genes, with one gene being toxic while the other confers immunity to this toxicity. 
 
@@ -59,3 +59,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abig.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF10899, PF16873
 ---
 
-# AbiG
 # AbiG
 The AbiG system is composed of 2 proteins: AbiGi and, AbiGii.
 
@@ -46,3 +46,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abih.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF14253
 ---
 
-# AbiH
 # AbiH
 ## Example of genomic structure
 
@@ -49,3 +49,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abii.md

@@ -10,7 +10,6 @@ tableColumns:
     Effector: Unknown
 ---
 
-# AbiI
 # AbiI
 ## Example of genomic structure
 

content/2.defense-systems/abij.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF14355
 ---
 
-# AbiJ
 # AbiJ
 ## Example of genomic structure
 
@@ -48,3 +48,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abik.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF00078
 ---
 
-# AbiK
 # AbiK
 ## Example of genomic structure
 
@@ -49,3 +49,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abil.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF13175, PF13304, PF13707
 ---
 
-# AbiL
 # AbiL
 ## Example of genomic structure
 
@@ -48,3 +48,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abin.md

@@ -10,7 +10,6 @@ tableColumns:
     Effector: Unknown
 ---
 
-# AbiN
 # AbiN
 ## Example of genomic structure
 

content/2.defense-systems/abio.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF01443, PF09848
 ---
 
-# AbiO
 # AbiO
 ## Example of genomic structure
 
@@ -48,3 +48,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abip2.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF00078
 ---
 
-# AbiP2
 # AbiP2
 ## Example of genomic structure
 
@@ -51,3 +51,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abiq.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF13958
 ---
 
-# AbiQ
 # AbiQ
 ## Example of genomic structure
 
@@ -49,3 +49,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abir.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF00176, PF00271, PF04545, PF04851, PF13091
 ---
 
-# AbiR
 # AbiR
 ## Example of genomic structure
 
@@ -48,3 +48,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abit.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF18864
 ---
 
-# AbiT
 # AbiT
 ## Example of genomic structure
 
@@ -48,3 +48,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abiu.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF10592
 ---
 
-# AbiU
 # AbiU
 ## Example of genomic structure
 
@@ -48,3 +48,4 @@ items:
 
 ---
 ::
+

content/2.defense-systems/abiv.md

@@ -8,9 +8,9 @@ tableColumns:
     Sensor: Unknown
     Activator: Unknown
     Effector: Unknown
+    PFAM: PF18728
 ---
 
-# AbiV
 # AbiV
 ## Example of genomic structure
 
@@ -48,3 +48,4 @@ items:
 
 ---
 ::
+