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Commit 0969d950 authored by ftesson's avatar ftesson
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Merge branch 'add_frontmatter' into 'dev' 

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content/2.defense-systems/abi2.md
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doi: 10.1016/j.mib.2005.06.006 doi: 10.1016/j.mib.2005.06.006
abstract: | abstract: |
Abortive infection (Abi) systems, also called phage exclusion, block phage multiplication and cause premature bacterial cell death upon phage infection. This decreases the number of progeny particles and limits their spread to other cells allowing the bacterial population to survive. Twenty Abi systems have been isolated in Lactococcus lactis, a bacterium used in cheese-making fermentation processes, where phage attacks are of economical importance. Recent insights in their expression and mode of action indicate that, behind diverse phenotypic and molecular effects, lactococcal Abis share common traits with the well-studied Escherichia coli systems Lit and Prr. Abis are widespread in bacteria, and recent analysis indicates that Abis might have additional roles other than conferring phage resistance. Abortive infection (Abi) systems, also called phage exclusion, block phage multiplication and cause premature bacterial cell death upon phage infection. This decreases the number of progeny particles and limits their spread to other cells allowing the bacterial population to survive. Twenty Abi systems have been isolated in Lactococcus lactis, a bacterium used in cheese-making fermentation processes, where phage attacks are of economical importance. Recent insights in their expression and mode of action indicate that, behind diverse phenotypic and molecular effects, lactococcal Abis share common traits with the well-studied Escherichia coli systems Lit and Prr. Abis are widespread in bacteria, and recent analysis indicates that Abis might have additional roles other than conferring phage resistance.
Sensor: ''
Activator: ''
Effector: ''
PFAM: PF07751
--- ---
# Abi2
# Abi2 # Abi2
The Abi2 system is composed of one protein: Abi_2. The Abi2 system is composed of one protein: Abi_2.
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## Relevant abstracts ## Relevant abstracts
content/2.defense-systems/abia.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF00078, PF18160, PF18732
--- ---
# AbiA
# AbiA # AbiA
The AbiA system have been describe in a total of 2 subsystems. The AbiA system have been describe in a total of 2 subsystems.
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content/2.defense-systems/abib.md
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Effector: Unknown Effector: Unknown
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# AbiB
# AbiB # AbiB
The AbiB system is composed of one protein: AbiB. The AbiB system is composed of one protein: AbiB.
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content/2.defense-systems/abic.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF16872
--- ---
# AbiC
# AbiC # AbiC
The AbiC system is composed of one protein: AbiC. The AbiC system is composed of one protein: AbiC.
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--- ---
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content/2.defense-systems/abid.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF07751
--- ---
# AbiD
# AbiD # AbiD
The AbiD system is composed of one protein: AbiD. The AbiD system is composed of one protein: AbiD.
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content/2.defense-systems/abie.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF08843, PF09407, PF09952, PF11459, PF13338, PF17194
--- ---
# AbiE
# AbiE # AbiE
AbiE is a family of an anti-phage defense systems. They act through a Toxin-Antitoxin mechanism, and are comprised of a pair of genes, with one gene being toxic while the other confers immunity to this toxicity. AbiE is a family of an anti-phage defense systems. They act through a Toxin-Antitoxin mechanism, and are comprised of a pair of genes, with one gene being toxic while the other confers immunity to this toxicity.
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content/2.defense-systems/abig.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF10899, PF16873
--- ---
# AbiG
# AbiG # AbiG
The AbiG system is composed of 2 proteins: AbiGi and, AbiGii. The AbiG system is composed of 2 proteins: AbiGi and, AbiGii.
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content/2.defense-systems/abih.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF14253
--- ---
# AbiH
# AbiH # AbiH
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abii.md
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Effector: Unknown Effector: Unknown
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# AbiI
# AbiI # AbiI
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abij.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF14355
--- ---
# AbiJ
# AbiJ # AbiJ
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abik.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF00078
--- ---
# AbiK
# AbiK # AbiK
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abil.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF13175, PF13304, PF13707
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# AbiL
# AbiL # AbiL
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abin.md
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Effector: Unknown Effector: Unknown
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# AbiN
# AbiN # AbiN
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abio.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF01443, PF09848
--- ---
# AbiO
# AbiO # AbiO
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abip2.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF00078
--- ---
# AbiP2
# AbiP2 # AbiP2
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abiq.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF13958
--- ---
# AbiQ
# AbiQ # AbiQ
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abir.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF00176, PF00271, PF04545, PF04851, PF13091
--- ---
# AbiR
# AbiR # AbiR
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abit.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF18864
--- ---
# AbiT
# AbiT # AbiT
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abiu.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF10592
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# AbiU
# AbiU # AbiU
## Example of genomic structure ## Example of genomic structure
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content/2.defense-systems/abiv.md
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Sensor: Unknown Sensor: Unknown
Activator: Unknown Activator: Unknown
Effector: Unknown Effector: Unknown
PFAM: PF18728
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# AbiV
# AbiV # AbiV
## Example of genomic structure ## Example of genomic structure
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