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content/2.defense-systems/gp29_gp30.md

@@ -27,7 +27,7 @@ Among the 22k complete genomes of RefSeq, this system is present in 314 genomes
 ::article-doi-list
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 items:
-    - 10.1038/nmicrobiol.2016.251
+    - doi: 10.1038/nmicrobiol.2016.251
 
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content/2.defense-systems/hachiman.md

@@ -41,7 +41,7 @@ Subsystem Hachiman Type II with a system from *Sphingopyxis witflariensis* in *E
 ::article-doi-list
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 items:
-    - 10.1126/science.aar4120
+    - doi: 10.1126/science.aar4120
 
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content/2.defense-systems/isg15-like.md

@@ -41,7 +41,7 @@ A system from *Thiomonas sp. FB-6* in *Escherichia coli* has an anti-phage effec
 ::article-doi-list
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 items:
-    - 10.1016/j.chom.2022.09.017
+    - doi: 10.1016/j.chom.2022.09.017
 
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content/2.defense-systems/kiwa.md

@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
 ::article-doi-list
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 items:
-    - 10.1126/science.aar4120
+    - doi: 10.1126/science.aar4120
 
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content/2.defense-systems/lamassu-fam.md

@@ -102,9 +102,9 @@ Subsystem DdmABC with a system from *Vibrio cholerae* in *Escherichia coli* has
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 items:
-    - 10.1016/j.chom.2022.09.017
-    - 10.1038/s41586-022-04546-y
-    - 10.1126/science.aar4120
+    - doi: 10.1016/j.chom.2022.09.017
+    - doi: 10.1038/s41586-022-04546-y
+    - doi: 10.1126/science.aar4120
 
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content/2.defense-systems/lit.md

@@ -33,9 +33,9 @@ A system from *Escherichia coli defective prophage e14* in *Escherichia coli* ha
 ::article-doi-list
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 items:
-    - 10.1073/pnas.91.2.802
-    - 10.1074/jbc.M002546200
-    - 10.1186/1743-422X-7-360
+    - doi: 10.1073/pnas.91.2.802
+    - doi: 10.1074/jbc.M002546200
+    - doi: 10.1186/1743-422X-7-360
 
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content/2.defense-systems/menshen.md

@@ -35,7 +35,7 @@ A system from *Solibacillus silvestris* in *Bacillus subtilis* has an anti-phage
 ::article-doi-list
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 items:
-    - 10.1016/j.chom.2022.09.017
+    - doi: 10.1016/j.chom.2022.09.017
 
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content/2.defense-systems/mok_hok_sok.md

@@ -33,7 +33,7 @@ A system from *R1 plasmid of Salmonella paratyphi* in *Escherichia coli* has an
 ::article-doi-list
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 items:
-    - 10.1128/jb.178.7.2044-2050.1996
+    - doi: 10.1128/jb.178.7.2044-2050.1996
 
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content/2.defense-systems/mokosh.md

@@ -39,7 +39,7 @@ Subsystem Type II with a system from *Escherichia coli* in *Escherichia coli* ha
 ::article-doi-list
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 items:
-    - 10.1016/j.chom.2022.09.017
+    - doi: 10.1016/j.chom.2022.09.017
 
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content/2.defense-systems/nhi.md

@@ -41,7 +41,7 @@ A system from *Vibrio vulnificus* in *Staphylococcus aureus* has an anti-phage e
 ::article-doi-list
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 items:
-    - 10.1016/j.chom.2022.03.001
+    - doi: 10.1016/j.chom.2022.03.001
 
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content/2.defense-systems/nixi.md

@@ -33,7 +33,7 @@ A system from *Vibrio cholerae* in *Vibrio cholerae* has an anti-phage effect ag
 ::article-doi-list
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 items:
-    - 10.1101/2021.07.12.452122
+    - doi: 10.1101/2021.07.12.452122
 
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content/2.defense-systems/nlr.md

@@ -53,7 +53,7 @@ Subsystem bNACHT09 with a system from *Escherichia coli* in *Escherichia coli* h
 ::article-doi-list
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 items:
-    - 10.1101/2022.07.19.500537
+    - doi: 10.1101/2022.07.19.500537
 
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content/2.defense-systems/old/abia.md

@@ -36,13 +36,13 @@ A system from *lactococcal plasmid* in *lactococci* has an anti-phage effect aga
 ::article-doi-list
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 items:
-    - 10.1016/j.mib.2005.06.006
-    - 10.1023/A:1002027321171
-    - 10.1093/nar/gkac467
+    - doi: 10.1016/j.mib.2005.06.006
+    - doi: 10.1023/A:1002027321171
+    - doi: 10.1093/nar/gkac467
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-<!-- 10.1016/j.mib.2005.06.006  -->
+<!-- doi: 10.1016/j.mib.2005.06.006  -->
 
 **Chopin, M.-C., Chopin, A. & Bidnenko, E. Phage abortive infection in lactococci: variations on a theme. Curr Opin Microbiol 8, 473-479 (2005).**
 Abortive infection (Abi) systems, also called phage exclusion, block phage multiplication and cause premature bacterial cell death upon phage infection. This decreases the number of progeny particles and limits their spread to other cells allowing the bacterial population to survive. Twenty Abi systems have been isolated in Lactococcus lactis, a bacterium used in cheese-making fermentation processes, where phage attacks are of economical importance. Recent insights in their expression and mode of action indicate that, behind diverse phenotypic and molecular effects, lactococcal Abis share common traits with the well-studied Escherichia coli systems Lit and Prr. Abis are widespread in bacteria, and recent analysis indicates that Abis might have additional roles other than conferring phage resistance.

content/2.defense-systems/old/avast.md

@@ -97,7 +97,7 @@ Subsystem CcAvs4 with a system from *Corallococcus coralloides* in *Escherichia
 ::article-doi-list
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 items:
-    - 10.1126/science.abm4096
-    - 10.1126/science.aba0372
+    - doi: 10.1126/science.abm4096
+    - doi: 10.1126/science.aba0372
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content/2.defense-systems/old/paris.md

@@ -53,8 +53,8 @@ Paris type II merge system in _Desulfovibrio desulfuricans_ (GCF\__000025705.1).
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 items:
-    - 10.1101/2021.01.21.427644
-    - 10.1093/nar/gkaa290
-    - 10.1016/0022-2836(75)90083-2
+    - doi: 10.1101/2021.01.21.427644
+    - doi: 10.1093/nar/gkaa290
+    - doi: 10.1016/0022-2836(75)90083-2
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\ No newline at end of file

content/2.defense-systems/olokun.md

@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
 ::article-doi-list
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 items:
-    - 10.1016/j.chom.2022.09.017
+    - doi: 10.1016/j.chom.2022.09.017
 
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content/2.defense-systems/pago.md

@@ -49,12 +49,12 @@ Subsystem SiAgo/Aga1/Aga2 with a system from *Sulfolobus islandicus* in *Sulfolo
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 items:
-    - 10.1016/j.cell.2022.03.012
-    - 10.1016/j.chom.2022.04.015
-    - 10.1038/s41564-022-01207-8
-    - 10.1038/s41586-020-2605-1
-    - 10.1186/1745-6150-4-29
-    - 10.1038/s41564-022-01239-0
+    - doi: 10.1016/j.cell.2022.03.012
+    - doi: 10.1016/j.chom.2022.04.015
+    - doi: 10.1038/s41564-022-01207-8
+    - doi: 10.1038/s41586-020-2605-1
+    - doi: 10.1186/1745-6150-4-29
+    - doi: 10.1038/s41564-022-01239-0
 
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content/2.defense-systems/pd-lambda-1.md

@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
 ::article-doi-list
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 items:
-    - 10.1038/s41564-022-01219-4
+    - doi: 10.1038/s41564-022-01219-4
 
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content/2.defense-systems/pd-lambda-2.md

@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
 ::article-doi-list
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 items:
-    - 10.1038/s41564-022-01219-4
+    - doi: 10.1038/s41564-022-01219-4
 
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content/2.defense-systems/pd-lambda-3.md

@@ -33,7 +33,7 @@ A system from *Escherichia coli* in *Escherichia coli* has an anti-phage effect
 ::article-doi-list
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 items:
-    - 10.1038/s41564-022-01219-4
+    - doi: 10.1038/s41564-022-01219-4
 
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