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Commit 2ffe49c0 authored by Remi  PLANEL's avatar Remi PLANEL
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fix bug when matrix one prot (need to look at multimer(homodimer))

parent 031015b9
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...@@ -17,7 +17,7 @@ const { mobile } = useDisplay(); ...@@ -17,7 +17,7 @@ const { mobile } = useDisplay();
const { page } = useContent(); const { page } = useContent();
const dbName = "structure" const dbName = "structure"
const filterBase = ref<string[]>([ const filterBase = ref<string[]>([
"prediction_type='multimer(dimer)'", "prediction_type='multimer(dimer)' OR prediction_type='multimer(homodimer)'",
"completed='true'" "completed='true'"
]) ])
const structureTitle = ref("Structure") const structureTitle = ref("Structure")
...@@ -77,15 +77,9 @@ function extractGeneName(name: string) { ...@@ -77,15 +77,9 @@ function extractGeneName(name: string) {
const groupedPdocks = computed(() => { const groupedPdocks = computed(() => {
const toValData = toValue(data) const toValData = toValue(data)
// const getSeqName = (d) => {
// if (d.includes("__")) {
// return d.split("__")[1]
// } else {
// return d
// }
// }
if (toValData?.hits) { if (toValData?.hits) {
return d3.groups(toValData.hits.flatMap(({ system, pDockQ, pdb, nb_sys, proteins_in_the_prediction, system_genes }) => {
const flattenMap = toValData.hits.flatMap(({ system, pDockQ, pdb, nb_sys, proteins_in_the_prediction, system_genes }) => {
if (proteins_in_the_prediction.length === 2) { if (proteins_in_the_prediction.length === 2) {
const sanitizedSystemGenes = system_genes.map(extractGeneName) const sanitizedSystemGenes = system_genes.map(extractGeneName)
const sanitizedProteins = proteins_in_the_prediction.map(extractGeneName) const sanitizedProteins = proteins_in_the_prediction.map(extractGeneName)
...@@ -102,12 +96,14 @@ const groupedPdocks = computed(() => { ...@@ -102,12 +96,14 @@ const groupedPdocks = computed(() => {
}) })
} else { } else {
return { key, system, system_genes: sanitizedSystemGenes, pDockQ, pdb, nb_sys, proteins_in_the_prediction: sanitizedProteins, protX: sanitizedProteins[0], protY: sanitizedProteins[1] } return [{ key, system, system_genes: sanitizedSystemGenes, pDockQ, pdb, nb_sys, proteins_in_the_prediction: sanitizedProteins, protX: sanitizedProteins[0], protY: sanitizedProteins[1] }]
} }
} else { } else {
throw createError(`More than 2 proteins in a dimer structure for system ${computedSystem.value} !`) throw createError(`More than 2 proteins in a dimer structure for system ${computedSystem.value} !`)
} }
}), d => d.system_genes.sort().join(" / ")) })
const groups = d3.groups(flattenMap, d => d.system_genes.sort().join(" / "))
return groups
} else { return [] } } else { return [] }
}) })
......
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