Skip to content
Snippets Groups Projects
Commit 52a592b5 authored by ftesson's avatar ftesson
Browse files

Merge branch 'lpaoli-main-patch-11434' into 'main'

Update panchino_gp28.md according to Hackaton guidelines, see...

See merge request !67
parents dfe02d84 b04181b9
No related branches found
No related tags found
2 merge requests!67Update panchino_gp28.md according to Hackaton guidelines, see...,!64Update ISG15-like
Pipeline #121013 passed with stages
in 8 minutes and 59 seconds
......@@ -7,13 +7,21 @@ tableColumns:
abstract: |
Temperate phages are common, and prophages are abundant residents of sequenced bacterial genomes. Mycobacteriophages are viruses that infect mycobacterial hosts including Mycobacterium tuberculosis and Mycobacterium smegmatis, encompass substantial genetic diversity and are commonly temperate. Characterization of ten Cluster N temperate mycobacteriophages revealed at least five distinct prophage-expressed viral defence systems that interfere with the infection of lytic and temperate phages that are either closely related (homotypic defence) or unrelated (heterotypic defence) to the prophage. Target specificity is unpredictable, ranging from a single target phage to one-third of those tested. The defence systems include a single-subunit restriction system, a heterotypic exclusion system and a predicted (p)ppGpp synthetase, which blocks lytic phage growth, promotes bacterial survival and enables efficient lysogeny. The predicted (p)ppGpp synthetase coded by the Phrann prophage defends against phage Tweety infection, but Tweety codes for a tetrapeptide repeat protein, gp54, which acts as a highly effective counter-defence system. Prophage-mediated viral defence offers an efficient mechanism for bacterial success in host-virus dynamics, and counter-defence promotes phage co-evolution.
PFAM: PF01170, PF02384, PF13588
contributors:
- Lucas Paoli
relevantAbstracts:
- doi: 10.1038/nmicrobiol.2016.251
- doi: 10.1038/nmicrobiol.2016.251
---
# Panchino_gp28
## To do
## Description
The Panchino gp28 defense system was described in :ref{doi=10.1038/nmicrobiol.2016.251} and is named after the Panchino prophage (on which it is located) and the corresponding gene. It is a single gene system.
## Molecular mechanisms
Panchino gp28 is act as a single gene type I restriction system :ref{doi=10.1038/nmicrobiol.2016.251,10.1016/j.mib.2023.102321}.
## Example of genomic structure
......@@ -79,4 +87,3 @@ end
style Title3 fill:none,stroke:none,stroke-width:none
style Title4 fill:none,stroke:none,stroke-width:none
</mermaid>
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment