feat: temptative Dockerfile for PasteurJanelia backend

Project.toml

 name = "LarvaTagger"
 uuid = "8b3b36f1-dfed-446e-8561-ea19fe966a4d"
 authors = ["François Laurent", "Institut Pasteur"]
-version = "0.18.4"
+version = "0.18.5"
 
 [deps]
 Colors = "5ae59095-9a9b-59fe-a467-6f913c188581"

recipes/Dockerfile

@@ -28,7 +28,7 @@ FROM base AS prebuild
 ENV PIP_DISABLE_PIP_VERSION_CHECK=1 \
     PIP_NO_CACHE_DIR=1 \
     POETRY_VIRTUALENVS_IN_PROJECT=1 \
-    POETRY_VERSION=1.2.0
+    POETRY_VERSION=1.8.3
 
 RUN apt-get update \
  && apt-get install --no-install-recommends -y python3-dev python3-pip \

recipes/Dockerfile.pasteurjanelia

+ARG BASE=latest
+
+FROM flaur/larvatagger:${BASE} AS prebuild
+
+ENV PIP_DISABLE_PIP_VERSION_CHECK=1 \
+    PIP_NO_CACHE_DIR=1 \
+    POETRY_VIRTUALENVS_IN_PROJECT=1 \
+    POETRY_VERSION=1.8.3
+
+RUN apt-get update \
+ && apt-get install --no-install-recommends -y wget \
+ && if ! command -v poetry; then \
+    apt-get install --no-install-recommends -y python3-dev python3-pip \
+ && pip install "poetry==$POETRY_VERSION"; \
+    fi \
+ && rm -rf /var/lib/apt/lists/*
+
+
+FROM prebuild AS backend
+
+ARG PROJECT_DIR=/app
+ARG BACKEND_BRANCH=main
+
+RUN cd $PROJECT_DIR \
+ && git clone --depth 1 --no-tags --single-branch -b $BACKEND_BRANCH https://gitlab.pasteur.fr/nyx/PasteurJanelia-adapter PasteurJanelia \
+ && cd PasteurJanelia \
+ && make package \
+ && rm -rf .git ~/.cache
+