@@ -47,6 +47,7 @@ Scripts and data used in the analysis and visualisation in the manuscript ``Trai
...
@@ -47,6 +47,7 @@ Scripts and data used in the analysis and visualisation in the manuscript ``Trai
| [Column names] 'trait_name': name of the trait
| [Column names] 'trait_name': name of the trait
| 'univ_hit_count': the number of non-independent variants significant by univariate gwas.
| 'univ_hit_count': the number of non-independent variants significant by univariate gwas.
| 'univ_hit_region_count': the number of independent region (loci) with variants significant by univariate gwas.
| 'univ_hit_region_count': the number of independent region (loci) with variants significant by univariate gwas.
| 'univ_hit_plinkclumps_count': the number of independent region estimated by plink that contain variants significant by univariate gwas.
|---- /JASS_5CVdata-2023-08-01 <- inputs and outputs in the regression analysis for estimating contributions of trait features to multi-trait gain (as in ~/Regression_Analysis/ below)
|---- /JASS_5CVdata-2023-08-01 <- inputs and outputs in the regression analysis for estimating contributions of trait features to multi-trait gain (as in ~/Regression_Analysis/ below)
| |---- 5foldCV_linear_summary_semilogadjust_log10_excCorVar.csv : summary of 5-fold cross validation with a linear model (main).
| |---- 5foldCV_linear_summary_semilogadjust_log10_excCorVar.csv : summary of 5-fold cross validation with a linear model (main).
| |---- 5foldCV_linear_summary_semilogadjust_log10_excCorVar_wMES.csv : summary of 5-fold cross validation with a lienar model when replacing %h2u with MES.
| |---- 5foldCV_linear_summary_semilogadjust_log10_excCorVar_wMES.csv : summary of 5-fold cross validation with a lienar model when replacing %h2u with MES.
