Added 4rth part (component that writes filtered fastq. Added tests for it. Had...
Added 4rth part (component that writes filtered fastq. Added tests for it. Had to refactor a little bit the FqBackends for it.
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- src/FqAuxBackend.cpp 5 additions, 5 deletionssrc/FqAuxBackend.cpp
- src/FqBaseBackend.cpp 97 additions, 24 deletionssrc/FqBaseBackend.cpp
- src/FqBaseBackend.h 31 additions, 8 deletionssrc/FqBaseBackend.h
- src/FqMainBackend.cpp 3 additions, 1 deletionsrc/FqMainBackend.cpp
- src/Makefile.am 5 additions, 3 deletionssrc/Makefile.am
- src/fqwriter.cpp 60 additions, 0 deletionssrc/fqwriter.cpp
- src/fqwriter.h 15 additions, 0 deletionssrc/fqwriter.h
- src/read_utils.cpp 3 additions, 3 deletionssrc/read_utils.cpp
- src/read_utils.h 4 additions, 1 deletionsrc/read_utils.h
- src/rock.cpp 15 additions, 23 deletionssrc/rock.cpp
- src/rock_commons.h 2 additions, 0 deletionssrc/rock_commons.h
- src/unit_test_fqreader.cpp 3 additions, 3 deletionssrc/unit_test_fqreader.cpp
- src/unit_test_fqwriter.cpp 138 additions, 0 deletionssrc/unit_test_fqwriter.cpp
- src/unit_test_read_utils.cpp 4 additions, 4 deletionssrc/unit_test_read_utils.cpp
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