did new implementation for using only the max(k-mer value, reverse complement...
did new implementation for using only the max(k-mer value, reverse complement value) in the CMS; updates unit tests accordingly.
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- src/CountMinSketch.cpp 29 additions, 7 deletionssrc/CountMinSketch.cpp
- src/CountMinSketch.h 18 additions, 7 deletionssrc/CountMinSketch.h
- src/FqBaseBackend.cpp 1 addition, 1 deletionsrc/FqBaseBackend.cpp
- src/ReadProcessor.cpp 1 addition, 6 deletionssrc/ReadProcessor.cpp
- src/ReadProcessor.h 1 addition, 1 deletionsrc/ReadProcessor.h
- src/fqwriter.cpp 1 addition, 1 deletionsrc/fqwriter.cpp
- src/read_utils.cpp 9 additions, 1 deletionsrc/read_utils.cpp
- src/unit_test_cms.cpp 3 additions, 2 deletionssrc/unit_test_cms.cpp
- src/unit_test_read_utils.cpp 17 additions, 21 deletionssrc/unit_test_read_utils.cpp
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