Merge branch 'master' of https://gitlab.pasteur.fr/vlegrand/ptv

README.md

@@ -27,8 +27,8 @@ genome and align them on the bacterial genome using the same mapping function. T
 The previous PhageTerm program (single phage analysis only) is still available at https://sourceforge.net/projects/phageterm/ (for versions <3.0.0)
 
 
-A Galaxy wrapper version is also available for the previous version at https://galaxy.pasteur.fr (only for the first version PhageTerm).
-PhageTermVirome is not implemented on Galaxy yet).
+A Galaxy wrapper version is also available for the first version of PhageTerm at https://galaxy.pasteur.fr.
+PhageTermVirome is not implemented on Galaxy yet.
 
 Since version 4.1, PhageTerm can work in 2 modes:
 - the usual mono machine mode (parallelization on several cores on the same machine). 
@@ -62,8 +62,8 @@ version 4.2 and higher work with python 3.9 up to python 3.13.
 
     export SKLEARN_ALLOW_DEPRECATED_SKLEARN_PACKAGE_INSTALL=True
 
-- download the .tar.gz file containing PhageTermVirome latest vesion from here : https://test.pypi.org/project/phagetermvirome/#files
-and unzip it. This should create a "phagetermvirome-4.2" directory. Go into it and type:
+- download the .tar.gz file containing PhageTermVirome latest vesion from here : https://pypi.org/project/phagetermvirome/#files
+and unzip it. This should create a "phagetermvirome-4.X" directory. Go into it and type:
     
     poetry install