- Jul 28, 2022
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Veronique Legrand authored
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- Jun 22, 2022
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Veronique Legrand authored
removed erreneous erros message that said that None was not an appropriate value for the test option
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- Jun 17, 2022
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Veronique Legrand authored
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- Jun 08, 2022
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Veronique Legrand authored
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Veronique Legrand authored
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- Mar 31, 2021
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Veronique Legrand authored
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- Mar 05, 2021
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Veronique Legrand authored
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- Feb 15, 2021
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Veronique Legrand authored
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- Jan 28, 2021
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Veronique Legrand authored
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- Nov 23, 2020
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Veronique Legrand authored
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- Nov 13, 2020
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Veronique Legrand authored
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- Oct 23, 2020
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Veronique Legrand authored
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- Aug 05, 2020
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Maximilian Press authored
cast main_utils.InputDerivedDataArgs.mean_virome to int for py3 compatibility of string multiplication.
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- Aug 04, 2020
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Maximilian Press authored
* IData_handling.genomeFastaRecovery had an extra open() of the file, and was reading the file without closing it, unsafely. Removed unneeded open(). * main_utils.checkFastaFile was using "U" option in opening files, not needed and deprecated. * read_Coverage_res was using time.clock() in a couple of places, which is deprecated. replaced with time.time().
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- Aug 03, 2020
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Maximilian Press authored
Changed _modules/ and PhageTerm.py and test_functions_PhageTerm_for_multi.py to use py3-style print functions. Py2-compatible due to __future__ imports. Also added both-versions compatible translate method in _modules/utilities.py.
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- Jul 31, 2020
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Maximilian Press authored
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Maximilian Press authored
- Test arguments (e.g. which test dataset to run) are not checked for validity, which leads to a confusing error. I added a check for this (an else block) with an informative error message. - I unpinned libcxx in env.yml file to work for me.
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- Jun 04, 2020
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Véronique LEGRAND authored
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- May 29, 2020
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Véronique LEGRAND authored
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- Apr 30, 2020
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Véronique LEGRAND authored
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- Apr 15, 2020
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Véronique LEGRAND authored
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- Apr 10, 2020
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Véronique LEGRAND authored
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- Apr 09, 2020
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Véronique LEGRAND authored
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- Apr 06, 2020
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Véronique LEGRAND authored
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- Mar 24, 2020
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Véronique LEGRAND authored
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- Mar 23, 2020
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Véronique LEGRAND authored
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- Mar 18, 2020
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Véronique LEGRAND authored
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- Feb 25, 2020
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Veronique Legrand authored
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- Feb 19, 2020
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Veronique Legrand authored
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- Jan 29, 2020
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Véronique LEGRAND authored
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- Jan 28, 2020
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Veronique Legrand authored
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- Jan 24, 2020
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Véronique LEGRAND authored
work in process for processing the mapping results produced by the GPU on several cores accross the cluster
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- Jan 12, 2020
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Véronique LEGRAND authored
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- Nov 15, 2019
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Véronique LEGRAND authored
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- Nov 12, 2019
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Veronique Legrand authored
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- May 09, 2019
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vlegrand authored
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- Feb 26, 2019
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Veronique Legrand authored
added comments in doxygen format for doc generation, added traces in debug mode, removed unuseful parameter
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- Feb 21, 2019
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Veronique Legrand authored
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- May 30, 2018
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Veronique Legrand authored
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- May 29, 2018
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Veronique Legrand authored
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