merge

README.md

Snakefile_d2

Snakefile_data_simu

deconvolution/d2graph/__init__.py

deconvolution/d2graph/d2_algorithms.py

deconvolution/d2graph/d2_graph.py

deconvolution/d2graph/d2_path.py

deconvolution/d2graph/path_algorithms.py

deconvolution/d2graph/path_optimization.py

deconvolution/debug_disct.py

deconvolution/dgraph/AbstractDGFactory.py

deconvolution/dgraph/AbstractDGIndex.py

deconvolution/dgraph/CliqueDGFactory.py

deconvolution/dgraph/FixedDGIndex.py

deconvolution/dgraph/LouvainDGFactory.py

deconvolution/dgraph/VariableDGIndex.py

deconvolution/dgraph/__init__.py

deconvolution/dgraph/d_graph.py

deconvolution/dgraph/graph_manipulator.py

deconvolution/main/__init__.py