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Created with Raphaël 2.2.021Aug205Mar419Feb87517Jan22Dec29Nov27201030Oct201816131211109528Sep1528Apr1321Feb171629Nov11Oct11SepUpdate README.md1.7.0 main1.7.0 mainMerge branch 'Integron_finder_updated_version_2.0.5' into 'main'Add a CHANGELOG.md file to track updates Update version to 1.7.0Fix number of lines to skip when reading Integron_finder output fileMerge branch 'Completion_of_missing_AMR_classifications' into 'main'1.6.11.6.1Changing Version & removing deprecated email contactMinor updateMinor updateSplitting update_database to allow update of missing Class & Subclass in fam.tabDependency test modification pandas chained assignment updateMerge branch 'Corynebacterium_resistance_database_update' into 'main'1.6.01.6.0Update_versionRemoving tox_diphtheriae from fam.tabRemoving duplicated prot sequenceRemoving DIP0543 (nanH in AMRdb)Referencing genes with family deleted in 'VIRULENCE_Corynebacterium'Keeping 'VIRULENCE_Corynebacterium' Family Removing deprecated familyremoving fam.tab duplicateremoved duplicated mutationUpdate dateMerge branch 'Format_db_for_armfinder_3.12' into 'main'1.5.01.5.0Delete database with duplicated "*"Adding last database (04-03)removal of duplicates *Update_version_numberRemoving old databaseUpdating databaseReformat_AMRPort_CdChange diphtoscan version (Update amrfinder required version)Update amrfinder required versionMinor changesMerge branch 'armfinder_nomenclature_update' into 'main'Change armfinder_to_tablesMerge branch 'absolute_paths' into 'main'Adding options to make HTTPS protocol worksChange of web address for downloading the resistance databaseReplace fasta variable by genome