Remove check pip show

pyproject.toml

@@ -11,7 +11,7 @@ description="Large scale comparative genomics tools: annotate genomes, do pangen
 requires-python = ">=3.7"
 keywords = ["persistent genome", "pangenome", "bacteria", "Bioinformatics", "Comparative genomics",
             "core genome", "phylogenetic tree", "alignment", "families"]
-license = {file = "COPYING"}
+license = {text = "aGPL v3"}
 classifiers = [
     "Environment :: Console",
     "Intended Audience :: Science/Research",

test/test_install/test_make_prokka-quicktree.py

@@ -52,17 +52,17 @@ def test_install_prokka_quicktree():
     assert utils.check_installed("prokka")
     assert utils.check_installed("PanACoTA")
     assert utils.check_installed('quicktree')
-    cmd = "pip3 show PanACoTA"
-    err = "error pip3"
-    stdout = "stdout_pip3show.out"
-    with open(stdout, "w") as stdof:
-        utils.run_cmd(cmd, err, stdout=stdof, stderr=stdof)
-    with open(stdout, "r") as stdof:
-        for line in stdof:
-            if line.startswith("Location"):
-                loc = line.split()[-1]
-                assert glob.glob(os.path.join(loc, r'PanACoTA*dist-info'))
-    os.remove(stdout)
+    # cmd = "pip3 show PanACoTA"
+    # err = "error pip3"
+    # stdout = "stdout_pip3show.out"
+    # with open(stdout, "w") as stdof:
+    #     utils.run_cmd(cmd, err, stdout=stdof, stderr=stdof)
+    # with open(stdout, "r") as stdof:
+    #     for line in stdof:
+    #         if line.startswith("Location"):
+    #             loc = line.split()[-1]
+    #             assert glob.glob(os.path.join(loc, r'PanACoTA*dist-info'))
+    # os.remove(stdout)
     logfile = "install.log"
     content = ["Installing PanACoTA...", "DONE",
                "Some dependencies needed for some subcommands of PanACoTA are "