Commit c1cbeb57 authored by Amandine  PERRIN's avatar Amandine PERRIN
Browse files

try to update blastp for prokka

parent 9d854c79
Pipeline #23309 failed with stage
in 5 minutes and 55 seconds
......@@ -19,6 +19,7 @@ build-test-image:
# - git checkout master -- requirements.txt
- docker build --pull -t "$CI_REGISTRY_IMAGE/testing-ubuntu" for_tests
- docker push "$CI_REGISTRY_IMAGE/testing-ubuntu"
- blastp --version
tags:
- k8s
......
......@@ -81,7 +81,7 @@ WORKDIR /tmp
RUN wget http://www.microbesonline.org/fasttree/FastTree.c &&\
gcc -DOPENMP -fopenmp -DUSE_DOUBLE -Wall -O3 -finline-functions -funroll-loops -o FastTreeMP FastTree.c -lm &&\
ln -s /tmp/FastTreeMP /usr/local/bin
## Install FastME FastME 2.1.6.1
WORKDIR /tmp
RUN apt-get install -y automake &&\
......
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