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Blaise LI
bioinfo_utils
Commits
15d0feef
Commit
15d0feef
authored
May 13, 2019
by
Blaise Li
Browse files
Moved plotting scripts to subdirectory.
parent
424f87f9
Changes
2
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create_metagene_profile.py
→
plotting_scripts/
create_metagene_profile.py
View file @
15d0feef
...
...
@@ -5,7 +5,6 @@ This script reads bigwig files, and creates a metagene profile.
The profiles can be restricted based on a list of gene identifiers.
"""
# TODO: Set vertical scale ?
# TODO: Set font size or graph width to avoid very large titles (also for the pipeline) ?
# TODO: What about using deeptools?
...
...
@@ -196,6 +195,7 @@ def fix_none(param_value):
DEFAULT_PARAMETERS
=
{
"upstream"
:
0
,
"downstream"
:
0
,
# TODO: change to 2000 ?
"body"
:
500
,
"bin size"
:
10
,
"ref point"
:
None
,
...
...
plot_lfclfc_scatter.py
→
plotting_scripts/
plot_lfclfc_scatter.py
View file @
15d0feef
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