Commit e501ff54 authored by Blaise Li's avatar Blaise Li
Browse files

Update mentions of genome preparation workflow.

Also made the genome preparation repository a submodule.
parent 14d5b6b4
......@@ -34,3 +34,6 @@
path = bam25prime
url = https://bioinfo_utils:UTSWyWVPdw_kbxWR7-zD@gitlab.pasteur.fr/bli/bam25prime.git
update = merge
[submodule "genome_preparation"]
path = genome_preparation
url = git@gitlab.pasteur.fr:bli/genome_preparation.git
......@@ -95,7 +95,7 @@ same way as described in the previous section.
### Genome preparation
A genome preparation workflow is available at
<https://gitlab.pasteur.fr/bli/10825_Cecere/-/tree/master/Genomes>
<https://gitlab.pasteur.fr/bli/genome_preparation>
This workflow will download genomic data from Illumina's iGenomes repository as
well as data regarding repeated elements directly from UCSC.
......
Subproject commit ad8d2cd7ce865ccc5ce4ee8a8d35813d7de702cc
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