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Blaise LI
libhts
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c74efa0f
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c74efa0f
authored
Jun 05, 2019
by
Blaise Li
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Added README with install instructions.
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# Miscellaneous things to process high throughput sequencing data.
This Python package also installs a shell script depending on samtools:
`sam2indexedbam.sh`
## Installing
Get the source using
`git clone git@gitlab.pasteur.fr:bli/libhts.git`
,
`cd`
into it and run
`python3 -m pip install .`
It might also work directly:
python3 -m pip install git+ssh://git@gitlab.pasteur.fr/bli/libhts.git
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