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Commit 90bf01f9 authored by Remi  PLANEL's avatar Remi PLANEL
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Remove longest_perfect_match_length from dataframe

parent 5964446a
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Pipeline #26167 passed
...@@ -95,8 +95,7 @@ def on_target_predict(seq, genome=None, seed_sizes=[8, 9, 10, 11, 12]): ...@@ -95,8 +95,7 @@ def on_target_predict(seq, genome=None, seed_sizes=[8, 9, 10, 11, 12]):
"pampos", "pampos",
"strand", "strand",
"recid", "recid",
"max_matching_len", "longest_perfect_match",
"max_matching_seq",
"pam_seq", "pam_seq",
"features", "features",
], ],
...@@ -113,11 +112,11 @@ def on_target_predict(seq, genome=None, seed_sizes=[8, 9, 10, 11, 12]): ...@@ -113,11 +112,11 @@ def on_target_predict(seq, genome=None, seed_sizes=[8, 9, 10, 11, 12]):
"off_target_pampos": off_t[2], "off_target_pampos": off_t[2],
"off_target_strand": off_t[3], "off_target_strand": off_t[3],
"off_target_recid": off_t[4], "off_target_recid": off_t[4],
"off_target_longest_perfect_match": off_t[6], "off_target_longest_perfect_match": off_t[5],
"off_target_pam_seq": off_t[7], "off_target_pam_seq": off_t[6],
"off_target_good_orientation": None, "off_target_good_orientation": None,
} }
index_features = 8 index_features = 7
# Loop through features associated to an off-target position # Loop through features associated to an off-target position
if len(off_t[index_features]) > 0: if len(off_t[index_features]) > 0:
# Loop for each feature # Loop for each feature
......
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