Explore projects
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GIPhy / FASTA2AGP
GNU Affero General Public License v3.0Creating an AGP file from a FASTA-formatted scaffold sequence file
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Bioimage Analysis / Matlab IO
GNU General Public License v3.0 onlyLow-level library for reading and writing Matlab .mat files
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Bioimage Analysis / Webcam Capture Library
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Matlab X Server
GNU General Public License v3.0 onlyUse Icy as an image viewer from Matlab
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Bioimage Analysis / Linear Programming
GNU General Public License v3.0 onlyA open-source utility library for linear programming in Java with the simplex algorithm.
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Bioimage Analysis / Filter Toolbox
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Mask Editor
GNU General Public License v3.0 onlyThis plugin is designed to manipulate binary masks over images. It contains all the basic tools to manage such objects.
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GIPhy / HCAP
GNU Affero General Public License v3.0Cropping reads to reach homogeneous composition among positions
Topics: fastqUpdated -
Bioimage Analysis / Color Bar
GNU General Public License v3.0 onlyDisplay the colormap over the image using an overlay.
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Bioimage Analysis / Apache XMLBeans
GNU General Public License v3.0 onlyUpdated -
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GIPhy / Concatenate
GNU Affero General Public License v3.0Building a supermatrix of characters from a set of multiple sequence alignments
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Bioimage Analysis / Icy BUnwarp
MIT LicenseB-spline registration adaptation for ICY based on BunwarpJ plugin from ImageJ
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GIPhy / C2A.A2C
GNU Affero General Public License v3.0Translating and back-translating codon and amino-acid sequence files
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Bioimage Analysis / Gson - deprecated
GNU General Public License v3.0 onlyGson library plugin for Icy
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PFCCB / Cytokinesis
GNU Affero General Public License v3.0This Icy bioimage analysis plugin was developped to help biologists detect late cytokinetic bridges on static immunofluorescence images.
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Bioimage Analysis / Track Processor Time Clip
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / ROI blocks
GNU General Public License v3.0 onlyROI blocks plugin for Icy. This plugin deliver a set of ROI tools to be used with Protocols (Graphical Programming).
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Bioimage Analysis / Webcam Capture Example
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Intensity Profile
GNU General Public License v3.0 onlyA plugin allowing to create a graphic showing the intensity profile of 2D ROIs
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