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Individual-based model of P. vivax transmission

coGSEA with the SetRank Method

Shiny app for the analysis of single cell data

Asia-Pacific ICEMER cohort ran in Madang (Papua New-Guinea) in early 2020. The purpose of this repository is to centralize R scripts and developments to streamline the data extraction and analysis.

Sero-prevalence estimates for human coronaviruses

Course material for the part about R and RStudio of the PhD course.

Repository containing code and data for the paper by Bosetti et al. "Epidemiology and control of SARS-CoV-2 epidemics in partially vaccinated populations: a modeling study applied to France"