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Compute RNA expression around a reference position

Some scripts to plot results from my HTS pipelines.

Evolutionary Contact wrapper for ARIA software

Deprojection of a 2D segmentation onto a 2.5D mesh

script that makes a visual representation of a spot containing ICE.

Find characters shared by a group of aligned sequences

Bio-Formats library patched for Icy. The patch consist of replacing Apache Commons IO library by a newer version and also replacing org.json library with the custom version embedded into Micro-Manager to make it work properly.

Napari plugin to ease manual correction of epithelial movie segmentation

Template to create new Icy extension (POM file and base plugin class)