Explore projects

Computing the probability that a phylogenetic tree is the result of a Yule process

building a minimal image based on Ubuntu LTS 18.04 for CI (based on the singularity recipe at https://gitlab.pasteur.fr/tru/ubuntu-lts18.04-maestro)

Beamer (LaTeX) template really close to the official Pasteur pptx theme

Neural SDE generative model for Drosophila larva 2D contour trajectories

A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jass

Python GUI to control an AOTF.

Minimum Spanning Tree-based clustering

Some wrappers for my snakemake HTS pipelines

Scripts to inject attc cassette in genome for Integron_Finder analysis

My own toolbox used for all the plugins I developed.

Webapp pour l'analyse de trajectoires

Low-level library for reading and writing Matlab .mat files

Use Icy as an image viewer from Matlab

Miscellaneous python things to deal with bam files