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LIANA: a LIgand-receptor ANalysis frAmework

COG annotation of CDS

Maestro Cluster documentation

This project contains the latest PhageTerm software source repository (multi machine version).

Running Jazayeri Simulations on Floelling Experiments

Downloading genome assembly files from GenBank or RefSeq

Extracting CDS from contig sequences

Assembling SSU

HUB transcriptomic snakemake pipeline

import from github

Estimating pairwise OGRIs between genomes (ANI, AAI, POCP, ...)

Preprocessing FASTQ files

Downloading FASTQ files from ENA

Shiny app for the analysis of single cell data