Explore projects

Icy is an open community platform for bioimage informatics

Some helpers for my HTS snakemake workflows.

Course material for the part about R and RStudio of the PhD course.

Code and data for the article "Integrating information from historical data into epidemic forecast: Application to influenza in France" by Alessio Andronico, Juliette Paireau and Simon Cauchemez

Smith-Waterman-based Average Nucleotide Identity

A python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium

2D viewer for behaving larvae, with manual and automatic behavior tagging capabilities

Interface between MaggotUBA and the Nyx tagging UI