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A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jass

One is the interaction layer between the Alyx database (metadatas) and your programmatic interface (python).

Projects specific python code pipeline for analysis

General python code for analysis pipeline

Icy is an open community platform for bioimage informatics

iPPI-DB - django application

Read Assignment, Mapping, and Phylogenetic Analysis in Real Time

A module handling basic fonctionnality needed in django project such as base.html using bootstrap, account settings, preferences management, ...

This will contain the minimal necessary codes to reproduce the image analysis (BF and IF) from the preprint https://arxiv.org/abs/2303.17522