2D viewer for behaving larvae, with manual and automatic behavior tagging capabilities

Icy is an open community platform for bioimage informatics

Insubstantial project (https://github.com/Insubstantial) clone for Icy (fixes + minors customizations). Previous version of the repository can be found at https://github.com/Icy-imaging/Icy-Insubstantial

Sequence blocks plugin for Icy. This plugin deliver a set of Sequence tools to be used with Protocols (Graphical Programming).

Script Editor plugin for Icy

RSyntaxTextArea library for Icy. Badically it provides a TextArea component with syntax highlight for different languages.

Rhino Library for Icy

Plugin Library used to provide autocompletion to JTextComponents, such as JTextArea or JTextField.

Common parent POM for all Icy related projects

This library contains the functions to convert TensorFlow 1 tensors into Icy sequences and viceversa. This library is compatible with TensorFlow versions up to 1.15

This Icy bioimage analysis plugin was developped to help biologists detect late cytokinetic bridges on static immunofluorescence images.

A python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium

PLUMED Masterclass 22.17

compress nd2 files

An app that index word used in text field across multiple model, and expose them to be searched.

HUB transcriptomic snakemake pipeline

Material for Diderot courses (2022-2023)